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Koberna Karel CSc.

Academic Title: RNDr.
Phone: +420 585632184
Groups: Staff, LEM, ÚMTM

About me

EDUCATION

1989 – 1994     Title CSc. (equivalent of PhD), Institute of Experimental Medicine AS CR, Thesis: “Metabolism of Extranucleolar RNA in Architecture of Cell Nucleus”.

1983 – 1988     Title MSc. and RNDr. (Rerum naturalium doctor), Faculty of Science, Charles University in Prague; Specialization – Molecular Biology, Diploma Thesis: “Ultrastructural Immunocytochemical Localization of DNA Replication in Synchronized 3T3 Cells”.

PUBLICATIONS

  1. Ligasová, A., et al. (2016) Open Biol, 6:150172
  2. Ligasová, A., Koberna, K. (2015) Methods Mol. Biol., 1351:81-92, M. McKenzie ed.
  3. Ligasová, A., et al. (2015) PLoS One 10(7): e0132393
  4. Ligasová, A., et al. (2015) PLoS One, 10(2): e0117459
  5. Cmarko, D., et al. (2014) Methods Mol. Biol., 1117:343-66, John Kuo ed.
  6. Ligasová, A., et al. (2013) PLoS One, 8(6):e66864
  7. Ligasová, A., et al. (2012) PLoS One, 7(12):e52584
  8. Liboska, R., et al. (2012) PLoS One, 7(12):e51679
  9. Ligasová, A., et al. (2011) Parasit. Vectors, 4:162
  10. Ligasová, A., Koberna, K. (2011) DNA replication-Current Advances, Intech, H. Seligmann ed.
  11. Ligasová, A., Koberna K. (2010) Nucleic Acids Res., 38(16):e167
  12. Ligasová, A., et al. (2009) J. Struct. Biol., 165(3):204-213
  13. Cvačková, Z., et al. (2008) Chromosoma, 117(5):487-497
  14. Kalmárová, M., et al. (2007) J. Struct. Biol., 160(1):49-56
  15. Cmarko, D., Koberna, K. (2007) Methods Mol. Biol. 369:213-228, J. Kuo ed.
  16. Stavreva, D. A., et al. (2006) Mol. Cell Biol., 26:5131-5145
  17. Smirnov, E., et al. (2006) Folia Biol., 52:59-70
  18. Fidlerová ,H., et al. (2005) J. Cell Biochem., 94:899-916
  19. Pliss, A., et al. (2005) J. Cell Biochem., 15:554-565
  20. Li, J., et al. (2005) EMBO J., 12:120-127
  21. Koberna, K., et al. (2005) J. Cell Biochem., 94(1):126-138
  22. Večeřová, J., et al. (2004) Mol. Biol. Cell, 15:4904-4910
  23. Raška, I., et al. (2004) Biol. Cell, 96:579-594
  24. Malínský, J., et al. (2002) J. Struct. Biol., 140:227-231
  25. Koberna, K., et al. (2002) J. Cell Biol., 157:743-748
  26. Kopský, V., et al. (2002) Fol. Biol. (Prague), 48:69-72
  27. Staněk, D., et al. (2001) Chromosoma, 110(7):460-470
  28. Malínský, J., et al. (2001) J. Cell Sci., 114(Pt 4):747-750
  29. Koberna, K., et al., (2000) Acta Histochem., 102(1):15-20
  30. Melčák, I., et al. (2000) Mol. Biol. Cell., 11(2):497-510
  31. Koberna, K., et al. (1999) Chromosoma, 108(5):325-335
  32. Koberna, K., et al. (1998) Reprod. Nutr. Dev., 38(1):117-126
  33. Schul, W., et al. (1996) EMBO J., 15(11):2883-2892
  34. Raška, I., et al. (1995) J. Struct. Biol., 114(1):1-22
  35. Raška, I., et al. (1992) Cell Biol. Int. Rep., 16(8):771-789
  36. Raška, I., et al. (1989) Exp. Cell Res., 184(1):81-89
  37. Raška, I., et al. (1987) Histochem. J., 19(10-11):603

PATENTS                                      

No. 295681: Method for the delivery of molecules and ions in living cells

No. 302613: Method for the detection of RNA molecules polyadenylated at the 3´ end and RNA molecules containing inner parts composed of several adenines by means of 5-bromo-2 ´-deoxyuridine, 5-iodo-2´-deoxyuridine and 5-chloro-2´-deoxyuridine in the triphosphate form in the permeabilised cells and tissues and on the sections of cells and tissues.

No. 303230: Method for the revelation of specific pyrimidine nucleosides in the structure of the double-stranded DNA for the reaction with antibodies that react with these nucleosides

No. 303251: Method for the labeling of double-stranded DNA molecules

No. 303252: Method for the elimination of antigen attribute of 5-ethynyl-2'-deoxyuridine and 5-ethynyluridine in the detection of nucleic acids

UTILITY MODELS

No. 28964: Kit for accessing specific pyrimidine nucleosides in the structure of two-chain DNA for reaction with antibodies that react with these nucleosides

HONOURS AND AWARDS

2003     Premium of Otto Wichterle for young scientists AS CR

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