Genomics Core Facility

The Genomics Core Facility in IMTM provides services using two different next-generation sequencing platforms from Illumina. Applications supported include:

  • Amplicon sequencing for metagenomic studies
  • Targeted sequencing of formalin fixed paraffin embedded (FFPE) samples
  • Transcriptome sequencing of humans
  • Whole genome sequencing of non-model organisms

 

Analysis from high throughput technologies is provided in cooperation with IT core facility. In addition, the Facility continues to offer a variety of traditional genetic services, including:

  • Comparative genomic hybridization (CGH)
  • Constructing of DNA FISH probes for designated genes/chromosomal areas
  • Fluorescent in situ hybridisation (FISH)
  • Fragment analysis
  • Genotyping, SNPs
  • High Resolution Melting Analysis (HRM)
  • Karyotyping
  • Microarray analysis
  • Reverse transcription Real-Time quantitative PCR
  • Real-Time quantitative PCR
  • Sanger sequencing

For your inquiry contact:

Personnel

Head of the facility: Jiří Drábek

  • Cytogenetics: Radek Trojanec

  • Next Genome Sequencing: Rastislav Slavkovský

  • Molecular genetic analysis of DNA: Jiří Drábek

  • Molecular genetic analysis of RNA: Josef Srovnal

Other personnels:

  • Zuzana Šporíková

  • Veronika Holinková

  • Soňa Mlčochová

  • Hana Jaworek

  • Jana Stránská

  • Kateřina Štaffová

  • Petr Vojta